2015-11-25 : 3312 EMDB map entries, 958 PDB coordinate entries PDBe | RCSB    

One-stop shop for 3DEM deposition and retrieval


3DEM test data

Raw image datasets

Several EM image datasets are publicly available to download for testing, please follow the links below:

2015 Map Challenge Benchmark Test Data

EMPIAR - EM Pilot Image Archive, multiple datasets related to EMDB map depositions

PDBe - ribosome (J. Frank) and GroEL (Birkbeck)

NCMI - Multiple datasets for GroEL and various viruses

NRAMM - TMV, Keyhole Limpet Hemocyanin, GroEL,Cowpea mosaic virus

Grigorieff Lab - amyloid, purple membrane, rotavirus, papillomavirus, TMV

Marlovits Lab - injectisome Salmonella needle complex


3DEM models

The 2010 Modeling Challenge was conceived as a way to create a diverse set of model data for testing of validation methods.  Click here for access to the 136 models submitted to the challenge.  As described here, the results of the challenge will also be collected in a special issue of Biopolymers.

Do you have or know of an additional resource for EM test data? Please let us know: help@emdatabank.org.